Overview

What do FreeAgent accountants handle for a UK micro-business?

FreeAgent accountants work in a UK-focused cloud platform owned by NatWest Group. It is free for NatWest, RBS and Mettle business banking customers, which made it the default for sole traders and freelancers banking there, and it appears on HMRC's list of software compatible with Making Tax Digital for VAT.

The interface is built for non-accountants, with simplified workflows for invoicing, expense capture and Self-Assessment preparation. For very small businesses (sole traders earning under £100k, micro Ltds under £200k turnover, single-director freelancers), FreeAgent is often the most cost-effective option, particularly where the £30/month subscription fee is bundled with banking. For larger or more complex businesses, Xero Certified Advisor accountants are generally a better fit, and we run that migration in either direction.

We are FreeAgent Practice Partners and certified on the platform. We handle the full scope of accounting work inside FreeAgent for clients who already use it, and we migrate clients to or from FreeAgent depending on what suits. Where several years of records need rebuilding first, that is quoted as catch-up bookkeeping before the monthly cloud bookkeeping service begins.

What we do in FreeAgent

What we run in FreeAgent.

A complete UK micro-business scope.

  • Daily bookkeeping Bank reconciliation, receipt capture, expense categorisation. Monthly close.
  • UK VAT (MTD) Quarterly MTD-compliant VAT returns filed via HMRC Agent. FreeAgent's MTD submission used directly.
  • Free Agent PayrollPAYE/NI for sole-director limited companies. Up to 5 employees typical scope.
  • Self-Assessment preparation For sole traders, FreeAgent's Self-Assessment workflow used. SA100 prepared and filed via HMRC Agent.
  • Corporation Tax (limited companies)Annual CT600 prepared from FreeAgent data. Filed via HMRC.
  • Annual accounts For limited companies, FRS 105 or FRS 102 Section 1A accounts prepared and filed at Companies House.
  • Migration to / from FreeAgentMigration from Excel or other platforms to FreeAgent. Or out of FreeAgent to Xero when you outgrow it.
  • Banking integration NatWest, RBS, Mettle bank feeds integrated natively. Other banks via Open Banking.
Best for

When FreeAgent is the right choice.

Specifically for UK micro-businesses.

01

NatWest / RBS / Mettle banking

Free with these business accounts. Material cost saving for sole traders.

02

UK sole traders

Self-Assessment workflow designed specifically for unincorporated traders.

03

Single-director Ltds

Simple structure handled cleanly. Annual accounts and Corporation Tax sit nicely.

04

Non-accountant friendly UI

Designed for business owners doing their own day-to-day. Less intimidating than Xero or QuickBooks.

Platform comparison

FreeAgent vs Xero vs QuickBooks for a UK micro-business.

Where FreeAgent wins, and the point at which it stops being the cheapest answer.

FreeAgent vs Xero vs QuickBooks for a UK micro-business.
CriterionFreeAgentXeroQuickBooks Online
Typical userSole trader or single-director Ltd under about £150k turnoverGrowing SMEs, employees, multi-currencyUS-facing businesses and UK firms already on it
Software costFree with a NatWest, Royal Bank of Scotland or Mettle business accountPaid on every planPaid on every plan
MTD for VATNative, direct HMRC submissionNativeNative in QuickBooks UK
Self-AssessmentBuilt in: SA100 workflow for sole traders and directorsNot native, prepared by us from the ledgerNot native
PayrollFine to around five employeesXero Payroll, no practical ceiling for an SMEQuickBooks Payroll or a Gusto-style integration
Stock and multi-currencyInvoicing in foreign currency only, no stockNative on Established and PremiumHigher plans only
Our positionDefault for UK sole trader accountingUpgrade path, see Xero Certified Advisor accountantsOnly where US exposure exists, see QuickBooks ProAdvisor accountants
The honest answer

When should you move off FreeAgent?

There is a real threshold and it is not turnover. FreeAgent stops being the right tool the first time you need something it deliberately does not do: hold stock, run more than about five people on payroll, consolidate a second company, or report in a currency other than sterling. Turnover around £150,000 to £250,000 is where most of our clients hit one of those, not because the number matters but because that is when the second employee and the first supplier abroad tend to arrive together.

The compliance calendar does not change when you switch. VAT registration is compulsory once taxable turnover passes the HMRC VAT registration threshold on a rolling 12-month basis, returns are due one calendar month and seven days after the period ends per the HMRC VAT deadline rules, and late submissions now attract points before penalties under the VAT penalty points regime. A sole trader on the standard quarterly cycle with a 31 March quarter end therefore files by 7 May. Our Making Tax Digital for VAT guide walks through where the digital link chain usually breaks.

From April 2026, sole traders and landlords with combined self-employment and property income above £50,000 also fall into Making Tax Digital for Income Tax, dropping to £30,000 from April 2027. That means four quarterly updates plus a final declaration instead of one Self-Assessment return due on 31 January. FreeAgent has built the workflow; the work is in getting the bookkeeping habit quarterly rather than annual. We cover the mechanics in MTD for Income Tax Self Assessment.

Limited companies on FreeAgent still have a separate filing life at Companies House: annual accounts within nine months of the year end, a confirmation statement every twelve months, and Corporation Tax payable nine months and one day after the period end, with the CT600 itself due twelve months after it. That work runs through our outsourced company secretary service, the tax through VAT and tax compliance, and the personal side through UK Self-Assessment tax return filing. For the wider UK picture see accountants for UK SMEs and, if you contract through your own company, accountants for freelancers and contractors. For the three-way UK comparison, including where FreeAgent stops being the right answer, see Xero vs FreeAgent vs Sage. Note that FreeAgent does not support the Construction Industry Scheme, so contractors should read our construction accountants page first. The accounting work that runs on top of the software, whichever platform you land on, is set out in our full range of accounting services.

"FreeAgent is free with my business account. Accountaire takes my data, does the Self-Assessment, files everything. Costs me £420/month total for accounting and software combined."
F
Freelance designerSole trader · NatWest banking

FreeAgent-specific questions.

Is FreeAgent really free?
Free for active NatWest, Royal Bank of Scotland or Mettle business banking customers. £19+VAT/month for sole traders without those bank accounts; £29+VAT/month for limited companies.
Can FreeAgent handle MTD for VAT?
Yes. FreeAgent is fully MTD-compliant. VAT returns are prepared and submitted via FreeAgent's direct HMRC integration.
When should I move from FreeAgent to Xero?
When you outgrow it, typically around £150–£250k turnover, when you have multiple employees, complex inventory, multi-currency requirements or need advanced reporting. FreeAgent is great for what it is; Xero is more capable for growth.
Is FreeAgent ready for MTD for Income Tax in 2026?
Yes. FreeAgent has implemented the MTD for ITSA workflow for sole traders and landlords with income above £50,000 (from April 2026). We're fully ready to file quarterly digital updates through it.
What does a FreeAgent accountant cost for a sole trader?
Our FreeAgent scope starts at £200 per month for a sole trader: monthly bookkeeping review, quarterly MTD VAT where registered, and the annual Self-Assessment return. Single-director limited companies start higher because annual accounts, the Corporation Tax return and the Companies House filings are added. If the software is free with your NatWest or Mettle account, there is no software line at all.
Do I still need an accountant if FreeAgent files my VAT return?
FreeAgent submits the number you approve. It does not decide whether a supplier invoice was zero-rated or exempt, whether a car lease is 50 per cent recoverable, or whether you should be on the Flat Rate Scheme. Those judgements are what the fee buys, and they are also what HMRC asks about on enquiry.
Will FreeAgent handle a company car or a director loan account?
It records both, but neither is automatic. A director loan overdrawn at the year end triggers a section 455 charge unless repaid within nine months and one day, and a company car needs a P11D or payrolling. We check both every year end rather than at the point the charge lands.
Can you migrate me from FreeAgent to Xero (or vice versa)?
Both directions, 2–3 weeks either way, which is at the short end of what migrations take. Historical data imported, chart of accounts mapped, opening balances reconciled. What eats the time is not the data. It is agreeing which reports you need working on day one, so we start from that list and work back to the ledger.
Alternatives we support

Other platforms.

ALT

Xero

For UK businesses outgrowing FreeAgent.

Explore
ALT

QuickBooks

Where US integration matters.

Explore
ALT

Sage

For UK SMEs with manufacturing or complex inventory.

Explore
Run on FreeAgent

Want FreeAgent-native accounting?

Thirty minutes to review your FreeAgent setup or migrate you onto it.