Overview

What do construction accountants actually handle?

Construction accountants run the Construction Industry Scheme alongside the normal accounts: verifying subcontractors with HMRC, deducting 20 or 30 per cent from the labour element of each payment, filing the monthly return by the 19th, and issuing payment and deduction statements. Everything else, from VAT to job costing, is built on top of that.

Construction is the one UK sector where the tax authority takes money out of your revenue before you have earned it. A subcontractor invoicing 30,000 pounds of labour a month receives 24,000 pounds, and the 6,000 pound difference sits with HMRC until a reclaim is processed. That is a working capital cost rather than a tax cost, and it is why profitable trades run out of cash.

We work with main contractors, groundworkers, electrical and mechanical firms, fit-out specialists, scaffolders, plant hire businesses and property developers acting as contractors. Most are contractor and subcontractor at once, running two sets of obligations in the same month. Several are deemed contractors that never thought of themselves as construction businesses at all, caught by the 3 million pound spend test.

The scheme is set out in HMRC's CIS 340 guide, and our own CIS scheme explained walkthrough covers the mechanics in detail. Where you engage workers through their own limited companies, the off-payroll rules sit on top of CIS, which we cover in the IR35 guide for contractors.

Cash and compliance

How does CIS change your cash flow?

By moving 20 per cent of every labour invoice out of your bank and into HMRC's. How you get it back depends on your structure. A limited company claims deductions each month on the Employer Payment Summary and sets them against PAYE, National Insurance and its own CIS liabilities, so the money returns within weeks. A sole trader or partnership waits for the Self-Assessment return, which can mean a fourteen month gap between deduction and repayment.

That structural difference is worth modelling before you incorporate rather than after. It is also the most common reason we find unclaimed CIS credits sitting in an HMRC account: companies that never filed an Employer Payment Summary, sometimes for two or three years, with a five figure balance nobody knew was there. We check for it on every new construction client. Our Self-Assessment filing service handles the sole trader claim and our multi-jurisdiction payroll service handles the company one.

The VAT domestic reverse charge for building and construction services removed a second float in March 2021. Subcontractors no longer hold customers' VAT between quarters, which for many businesses had been a permanent interest-free loan. Moving to monthly VAT returns usually recovers part of that position, and it is one of the first changes we make. The detail sits with our VAT and tax compliance service, and HMRC's technical position is in the VAT Construction manual.

Gross payment status removes the deduction entirely. Protecting it is a commercial priority rather than an administrative one, because it is reviewed annually against a compliance test that since 6 April 2024 takes in VAT obligations as well. One late VAT return can cost it. Lose it mid-job and every remaining invoice on work already priced and started becomes an 80 per cent payment. HMRC sets out the route at apply for gross payment status. Subcontractors trading in their own name rather than through a company will find the annual side covered on our sole trader accountants page. The wider scope we run for construction clients sits in our directory of accounting services.

Deduction rates

What gets deducted, and from what

The rate applies to the labour element only, after materials, plant hire and VAT are stripped out.

What gets deducted, and from what
Subcontractor statusDeduction rateWhat triggers itCash effect on a 10,000 pound labour invoice
Gross payment status0 per centBusiness, turnover and compliance tests passed10,000 pounds received
Registered for CIS20 per centHMRC verification matches name and UTR8,000 pounds received, 2,000 held by HMRC
Not registered or unverified30 per centVerification fails, or was never carried out7,000 pounds received, 3,000 held by HMRC
Employee, not a subcontractorPAYE and NICWorking practices show employment rather than self-employmentFull payroll cost, employer NIC on top
Company subcontractor inside IR35PAYE via the fee payerOff-payroll rules apply to the engagementDeemed employment payment, CIS does not apply
What we handle

Construction-specific scope.

Built around the scheme, the reverse charge and the job.

  • Subcontractor verification Every new subcontractor verified with HMRC before the first payment, with the verification number recorded against the supplier.
  • Monthly CIS returnsFiled by the 19th, including nil returns, with inactivity notified rather than left to accumulate penalties.
  • Payment and deduction statements Issued to every subcontractor within 14 days of the tax month end, so their reclaim is never held up by missing paperwork.
  • Materials and labour split Documented on the invoice rather than estimated, so the deduction can still be evidenced two years later.
  • CIS suffered, reclaimed Employer Payment Summary filed monthly for companies, Self-Assessment credit claimed for sole traders, historic balances recovered.
  • Gross payment status monitoring Filing and payment calendar treated as a covenant, with the annual review anticipated rather than discovered.
  • VAT domestic reverse charge Invoice wording, end user confirmations and return treatment, plus the monthly VAT election where it improves cash.
  • Job costing and retentions Margin per contract, retentions tracked to the release date, and applications for payment reconciled to certificates.
Why us

Why construction businesses choose us.

Fixed fee, monthly filings, and the deduction ledger reconciled every month.

01

CIS run monthly

Verification, returns and statements on a fixed calendar, not at year end.

02

Deductions reclaimed

Historic CIS balances traced and recovered, not left sitting with HMRC.

03

Reverse charge handled

Invoice wording and end user status confirmed in writing before the job starts.

04

Margin per contract

Job costing that shows which contracts made money while you can still act on it.

What construction accountants are asked about CIS.

Do I need to register for CIS if I only use one subcontractor?
Yes. Contractor status is triggered by paying anyone for construction work, not by volume. One subcontractor means verification, deduction, a monthly return and a payment and deduction statement, on exactly the same calendar as a business paying fifty.
Am I a deemed contractor if construction is not my main business?
A business outside construction becomes a deemed contractor once its spend on construction operations exceeds 3 million pounds in the previous 12 months. Retailers, manufacturers and property investors running fit-out programmes are the ones most often caught without realising it, so measure the rolling 12 month spend rather than the trade you think you are in.
Can you recover CIS deductions from previous years?
Company deductions that were never claimed on an Employer Payment Summary sit as a credit with HMRC and can usually be reclaimed or set against Corporation Tax. We trace the deduction history against payment and deduction statements, then reconcile it to the HMRC account before claiming.
How do you price construction accounting?
On the number of subcontractors verified and paid each month, the number of live contracts you want costed, and whether payroll and VAT are in scope. Fixed monthly fee, quoted after we see a month of payments, with no separate charge for the CIS return itself.
Do you handle retentions and applications for payment?
Yes. Retentions are tracked to their release date rather than written off into debtors, and applications for payment are reconciled to certificates so the revenue in your accounts matches what the client has actually certified. Both are routine sources of overstated profit in construction ledgers.
What software do you use for construction clients?
Xero or Sage in most cases, because both support CIS and the VAT domestic reverse charge. FreeAgent does not support CIS, so we do not recommend it for contractors. Where job costing needs more depth than the ledger provides, we add a dedicated contract costing layer.
Can you take over an existing scheme mid-year?
Mid-year is usually the right time to move. We reconcile the deductions filed to date, check the verification records, fix any nil returns that were never submitted, and take over from the next tax month so nothing is filed twice or missed at the handover.
Recommended services

The usual next step.

GUIDE

CIS scheme explained

Rates, deadlines, penalties and gross payment status in full.

Explore
PAYROLL

Payroll and CIS reclaims

Employer Payment Summary filed monthly so deductions come back.

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VAT

VAT and the reverse charge

Monthly returns where they improve cash, wording checked before invoicing.

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INDUSTRY

Sole trader accounting

For subcontractors trading unincorporated.

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MARKET

UK accounting service

The full HMRC and Companies House calendar, handled.

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For construction

Want CIS handled properly?

Thirty minutes to review your scheme, your deduction ledger and what HMRC is still holding.